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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015927974.1_cds_XP_016475631.1_67543
CDS Infomation

[gene=LOC107797277] [db_xref=GeneID:107797277] [protein=probable trehalose-phosphate phosphatase J] [protein_id=XP_016475631.1] [location=complement(join(25992..26099,26369..26461,26629..26699,26815..26962,27142..27300,27433..27525,27641..27712,27821..27961,28061..28348))] [gbkey=CDS]
Sequence

ATGACTCAGCAGAATGTGGTAGTGTCCGATCCTAAATCCGGTATTAATTTGGCAATATCA
GTGAAGTTACAAGTACCATCAAACTCCCCCGCGCTGTTCACGACGGCGGTACAAAAGCCG
CCACCGGCGCCGGGGAGTTGCATCACCATTTCAAGAAAGACACTTGTTGAAATCAATGGG
AATAATAATGGTGCTAGAATCAACTCTTGGGTTGATTCAATGAGAGCTTCCTCTCCTACT
CATCACAAATCCACTCCTCCTCTTTCAGATGACATCAATTCTTGGACGGTGCAACATCCA
TCAGCACTGGATATGTTTGAGCAGATAATAACTGCTTCAAAGGGAAAGCAAATAGTGATG
TTTTTAGACTATGACGGCACACTTTCCCCCATTGTTGAGGATCCTGATCAAGCTTTCATG
TCTGAAGCTATGAGAGCAACAGTGCGAAAACTTGCTAGATATTTCCCTACTGCAATAGTG
AGTGGAAGGTGCAGAGACAAGGTATACAACTTTGTACGATTGGCAGAGTTGTACTATGCT
GGAAGCCATGGAATGGATATAAAAGGACCATCAAAAGGTTCCAAATACAAGAAAGGAGCA
GAAGCTGTTCTTTGCCAACCAGCAAGTGAATTTCTACCAATGATTGATGAGGTTTACAAA
GCACTCATTGATGCAACAAAGTCTACAGAAGGGGTTATAGTGGAGAATAACAAGTTTTGT
GCCTCTGTACATTTCCGCTGTGTTGATGAAAAGAAATGGGGTGAATTAGCACAAGTCGTA
AGGTCAGTGCTTAAAGAATACCCAAAGCTGAGATTAACACAAGGAAGAAAAGTATTTGAG
ATCCGTCCTACTATTAAATGGGACAAAGGCAAAGCTCTTGAATTCTTGCTTGAATCCCTT
GGATATGCTAACTGTACTGATGTATTTCCTGTATATATTGGTGATGATCGAACCGATGAA
GATGCTTTCAAGGTTCTAAGAGAAAGAGGACAGGGTTTTGGCATTCTTGTCTCCAAAATT
CCTAAGGACACACATGCATCTTATTCTTTACAAGAACCATCTGAGGTTATGGTGTTTCTA
CGACGCTTGGTAGAGTGGAAAAAGTTATCGTTAAGAAGACAGTTTAGAATTCGAAGACAA
ATTGAAGAGATAAAAGCATCTCTACGGAACTAA

Peptide Sequence

PEP ID

XP_016475631.1
PEP Infomation

PREDICTED: probable trehalose-phosphate phosphatase J [Nicotiana tabacum]
Sequence

MTQQNVVVSDPKSGINLAISVKLQVPSNSPALFTTAVQKPPPAPGSCITISRKTLVEING
NNNGARINSWVDSMRASSPTHHKSTPPLSDDINSWTVQHPSALDMFEQIITASKGKQIVM
FLDYDGTLSPIVEDPDQAFMSEAMRATVRKLARYFPTAIVSGRCRDKVYNFVRLAELYYA
GSHGMDIKGPSKGSKYKKGAEAVLCQPASEFLPMIDEVYKALIDATKSTEGVIVENNKFC
ASVHFRCVDEKKWGELAQVVRSVLKEYPKLRLTQGRKVFEIRPTIKWDKGKALEFLLESL
GYANCTDVFPVYIGDDRTDEDAFKVLRERGQGFGILVSKIPKDTHASYSLQEPSEVMVFL
RRLVEWKKLSLRRQFRIRRQIEEIKASLRN

Transcript Sequence

Gene sequence data has not been registered.